Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015938020.1_cds_XP_016483037.1_74192
CDS Infomation

[gene=LOC107803783] [db_xref=GeneID:107803783] [protein=AAA-ATPase At3g28580-like] [protein_id=XP_016483037.1] [location=complement(16200..17765)] [gbkey=CDS]
Sequence

ATGGGAACTTCATTGACCGAAGTTGGGTCCAGGCTTGCTGGAATAATGTTCATATGGGGC
ACAATTCAACAACTCTTCCCTCAAATAATCCGTAGGCGAATCGAAACCTTCTGGAATCGA
CTTGAAAATTACTTCTACCCTTATGTAGAAATCACCATTGATGAATTCTCCAGTGGTATA
AACAATGAAATTTACAACCATGTCAACAATTATTTGAGTACGAAGTCTATAAGCAATGAT
GCTAAACATCTCAAAGCTGAAAAATTCAAGAACATCAAGTCTTGTGCTGTTATTTTGGAT
GAAGGAGAATCAACTATTGATGAATTTCAAGGTGCGAAACTTTGTTGGCGCTTTCATAAG
GAAACATTGAGGGACGATTCTCAAGGGCATAATTCCCTTCCAATTGAGAAGAAAAGTTAC
AGTTTAACGTTCAATCAAGAATATCGAGAAATTGTCACAGAAAAATACTTGAAGTATGTG
ATGGAAGAAGGCAAAGCGATTGAATTCAAAAACAAGAAACAGAGGATTTACTGTAATGAC
AATAATGGGGATAATTATTATACACGTTGGTATGGTATGTGGAAGCATATTAATTTCGAG
CATCCTGCAACTTTTGATACTTTGGCTATGGACCCTAAGAAAAAAGAGGAAATAAAAAAC
GATCTCGTTGCTTTTAGTGAGGGGAAGAATTTTTATTCTAGTGTAGGCAAGGCATGGAAG
CGCGGCTATCTTCTTTACGGTCCACCAGGAACGGGGAAATCAACAATGATTGCAGCTATT
GCGAATTTCTTGAACTATGATATTTATGATCTTGAGCTTACCTCAGTTAAAAATAACTTA
GGTCTTAAGAAGTTGCTCATGGAAACAACAAGCAAGTCTATTATTGTCGTTGAAGATATT
GATTGCTCTGTTGATTTGACAGGCAAGAGAAAGAAGAAAAAGAAAGAAGAAAATTCTGAC
GATGATGACTCAGATTCGGATTCGGATTCCGATTCAGACTCAGACTCAGATAGCGAGAAG
AAAAAATCCAGCAAACTTACACTTTCAGGGCTGTTGAATTGCATTGATGGAATATGGTCA
GCTTGTGGTCAAGAAAGAATCATTATATTTACGACTAATTATAAGGAAAAACTTGATCCA
GCTCTGATACGCAGAGGACGGATGGATATGCACATTGAGATGTCGTATTGCAAATTTGAA
GCATTCAAAGTATTGGCTAAGAATTACTTGAGAATTGAAACTCACGATTTGTTTGAAGAA
ATTCAACGATTACTAGAGGAAGTAAACATGAGTCCTTGTGATGTGGCTGAATATTTGATA
CACAAGAATACTTCAGGAGGGCCTGAAATTTGCTTGAATAACTTAATTCAGGCTCTGAAA
GAGGCCAAGGAAGAGGCAAAGGAAAAGGCAAATCAAGACCAAAAAGAAACCAAGGAAGAG
GTAAAGGAAAATCAAGATTCAAGAGAAGCCAAGGAAAACAAAAAGTTACCCGCTAAATTA
GTTACTACAAGTTATGGCCGTCTAAAAAAACTTTTCAAAAAAAGTGTGCCATATTTATCT
TCTTAG

Peptide Sequence

PEP ID

XP_016483037.1
PEP Infomation

PREDICTED: AAA-ATPase At3g28580-like [Nicotiana tabacum]
Sequence

MGTSLTEVGSRLAGIMFIWGTIQQLFPQIIRRRIETFWNRLENYFYPYVEITIDEFSSGI
NNEIYNHVNNYLSTKSISNDAKHLKAEKFKNIKSCAVILDEGESTIDEFQGAKLCWRFHK
ETLRDDSQGHNSLPIEKKSYSLTFNQEYREIVTEKYLKYVMEEGKAIEFKNKKQRIYCND
NNGDNYYTRWYGMWKHINFEHPATFDTLAMDPKKKEEIKNDLVAFSEGKNFYSSVGKAWK
RGYLLYGPPGTGKSTMIAAIANFLNYDIYDLELTSVKNNLGLKKLLMETTSKSIIVVEDI
DCSVDLTGKRKKKKKEENSDDDDSDSDSDSDSDSDSDSEKKKSSKLTLSGLLNCIDGIWS
ACGQERIIIFTTNYKEKLDPALIRRGRMDMHIEMSYCKFEAFKVLAKNYLRIETHDLFEE
IQRLLEEVNMSPCDVAEYLIHKNTSGGPEICLNNLIQALKEAKEEAKEKANQDQKETKEE
VKENQDSREAKENKKLPAKLVTTSYGRLKKLFKKSVPYLSS

Transcript Sequence

Gene sequence data has not been registered.